2vfc -- Pocketfinder

Prediction Images

Residue Predictions

Pocket Predictions

• Visualize predictions using Jmol.

• Download PyMol visualization script: 2vfc_pocketfinder_search_blur.pml.
  (Requires residue PDB file and pocket DX file)

Score Files

• Pocket grid scores:
  PDB format
  DX format

• Residue scores:
  Chain A
  PDB (score in TempFactor field)
  

• Conservation scores:
  (calculated using Jensen-Shannon divergence on HSSP alignments)
  Chain A
  

Back to Pocketfinder structure list.