Predictions
- Visualize predictions using Jmol.
- Download PyMol visualization
script: 3cs0_cc-ligsite_search_blur.pml.
(Requires residue PDB file and pocket DX file)
Score Files
- Pocket grid scores:
PDB format
DX format - Residue scores:
Chain A
Chain C
Chain E
Chain G
Chain I
Chain K
Chain M
Chain O
Chain Q
Chain S
Chain U
Chain W
Chain Y
Chain a
Chain c
Chain e
Chain g
Chain i
Chain k
Chain m
Chain o
Chain q
Chain s
Chain u
PDB (score in TempFactor field)
- Conservation scores:
(calculated using Jensen-Shannon divergence on HSSP alignments)
Chain A
Chain C
Chain E
Chain G
Chain I
Chain K
Chain M
Chain O
Chain Q
Chain S
Chain U
Chain W
Chain Y
Chain a
Chain c
Chain e
Chain g
Chain i
Chain k
Chain m
Chain o
Chain q
Chain s
Chain u
Back to ConCavityLigsite structure list.