Example Predictions

Ligand binding site prediction from protein sequence and structure

This webpage provides tools, data, and source code in support of the paper:

Capra JA, Laskowski RA, Thornton JM, Singh M*, and Funkhouser TA*(2009) Predicting Protein Ligand Binding Sites by Combining Evolutionary Sequence Conservation and 3D Structure. PLoS Comput Biol, 5(12). [Paper] [Supplementary Text]

Please cite the paper if you use any of the resources below.

Quick Predict

PDB ID: (e.g. 1g6c)    

Note that predictions are made on the quaternary structures predicted by PQS for each PDB file.


Source Code

Supplementary Material