SPICi:   Speed and Performance In Clustering
SPICi (pronounced "spicy") is a fast local network clustering algorithm. SPICi runs in time O(Vlog V +E) and space O(E), where V and E are the number of vertices and edges in the network. It also has state-of the-art performance with respect to the quality of the clusters it uncovers. The source code of SPICi could be found in Downloads section; or you could try it online with the form below. The help content of each field will be displayed upon mouse over.Example:
A  B  0.7
C  D  0.9
...
Output: Each line represents a cluster. Gene names are separated by tab.