motifsearch
|-- Config.h
|-- DNA.cpp
|-- DNA.h
|-- DNAFreq.cpp
|-- DNAFreq.h
|-- DNAPair.cpp
|-- DNAPair.h
|-- Fasta.cpp
|-- Fasta.h
|-- INSTALL
|-- LICENSE
|-- Makefile
|-- Misc.cpp
|-- Misc.h
|-- README
|-- Seq.cpp
|-- Seq.h
|-- Site.cpp
|-- Site.h
|-- SitePairScorer.cpp
|-- SitePairScorer.h
|-- SiteScorer.cpp
|-- SiteScorer.h
|-- SiteScorerFactory.cpp
|-- SiteScorerFactory.h
|-- Table.h
|-- gcc
|   |-- getopt.c
|   |-- getopt.h
|   `-- getopt1.c
|-- gsl
|   |-- gsl_cdf.h
|   |-- gsl_math.h
|   |-- gsl_nan.h
|   |-- gumbel1.c
|   `-- gumbel1inv.c
|-- motifsearch.cpp
`-- motifsearch.h

2 directories, 36 files